MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Pasteurella sp.
19428wF3_WM03
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 32
bases: 2,266,646 bps
CDS: 2,131
rRNA: 11
tRNA: 51
tmRNA: 1
Total number of protein coding genes annotated/found:
2,077
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5022|JADGKV010000005.1
MBF0751736.1
Genome Viewer
NA
AA
899/299
899-1
type VI secretion system tip protein VgrG
SEQF5022|JADGKV010000005.1
MBF0751737.1
Genome Viewer
NA
AA
3513/1171
4444-932
type VI secretion system membrane subunit TssM
SEQF5022|JADGKV010000005.1
MBF0751738.1
Genome Viewer
NA
AA
1356/452
6121-4766
type VI secretion system protein TssA
SEQF5022|JADGKV010000005.1
MBF0751739.1
Genome Viewer
NA
AA
651/217
6802-6152
type VI secretion system-associated protein TagO
SEQF5022|JADGKV010000005.1
MBF0751740.1
Genome Viewer
NA
AA
2619/873
9405-6787
type VI secretion system ATPase TssH
SEQF5022|JADGKV010000005.1
MBF0751741.1
Genome Viewer
NA
AA
750/250
10165-9416
DotU family type IV/VI secretion system protein
SEQF5022|JADGKV010000005.1
MBF0751742.1
Genome Viewer
NA
AA
1344/448
11490-10147
type VI secretion system baseplate subunit TssK
SEQF5022|JADGKV010000005.1
MBF0751743.1
Genome Viewer
NA
AA
546/182
12039-11494
type VI secretion system lipoprotein TssJ
SEQF5022|JADGKV010000005.1
MBF0751744.1
Genome Viewer
NA
AA
1239/413
13286-12048
type VI secretion system-associated FHA domain protein TagH
SEQF5022|JADGKV010000005.1
MBF0751745.1
Genome Viewer
NA
AA
1044/348
14489-13446
type VI secretion system baseplate subunit TssG
SEQF5022|JADGKV010000005.1
MBF0751746.1
Genome Viewer
NA
AA
1794/598
16246-14453
type VI secretion system baseplate subunit TssF
SEQF5022|JADGKV010000005.1
MBF0751747.1
Genome Viewer
NA
AA
447/149
16705-16259
type VI secretion system baseplate subunit TssE
SEQF5022|JADGKV010000005.1
MBF0751748.1
Genome Viewer
NA
AA
1485/495
18194-16710
type VI secretion system contractile sheath large subunit
SEQF5022|JADGKV010000005.1
MBF0751749.1
Genome Viewer
NA
AA
501/167
18716-18216
type VI secretion system contractile sheath small subunit
SEQF5022|JADGKV010000005.1
MBF0751750.1
Genome Viewer
NA
AA
519/173
18950-19468
Hcp family type VI secretion system effector
SEQF5022|JADGKV010000005.1
MBF0751751.1
Genome Viewer
NA
AA
420/140
19550-19969
DUF1795 domain-containing protein
SEQF5022|JADGKV010000005.1
MBF0751752.1
Genome Viewer
NA
AA
4566/1522
19978-24543
PAAR domain-containing protein
SEQF5022|JADGKV010000005.1
MBF0751753.1
Genome Viewer
NA
AA
339/113
24558-24896
hypothetical protein
SEQF5022|JADGKV010000005.1
MBF0751754.1
Genome Viewer
NA
AA
333/111
25082-25414
hypothetical protein
SEQF5022|JADGKV010000005.1
MBF0751755.1
Genome Viewer
NA
AA
330/110
26075-26404
DNA polymerase III
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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